Showing metabocard for LysoPI(20:4(5Z,8Z,11Z,14Z)/0:0) (BMDB0109672)

IdentificationTaxonomyPhysical propertiesPathwaysSpectraConcentrationsLinksReferencesXML
Record Information
Version1.0
Creation Date2020-05-05 15:49:37 UTC
Update Date2020-05-05 18:39:03 UTC
BMDB IDBMDB0109672
Secondary Accession NumbersNone
Metabolite Identification
Common NameLysoPI(20:4(5Z,8Z,11Z,14Z)/0:0)
DescriptionLysoPI(20:4(5Z,8Z,11Z,14Z)/0:0), also known as pi(20:4(5Z,8Z,11Z,14Z)/0:0) or lysophosphatidylinositol(20:4), belongs to the class of organic compounds known as 1-acyl-sn-glycerol-3-phosphoinositols. These are glycerophosphoinositols where the glycerol is acylated only at position O-1 with a fatty acid. LysoPI(20:4(5Z,8Z,11Z,14Z)/0:0) is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Thumb
MOLSDFPDBSMILESInChI
Synonyms
ValueSource
1-(5Z,8Z,11Z,14Z-Eicosatetraenoyl)-sn-glycero-3-phospho-(1'-myo-inositol)ChEBI
1-ArachidonoylglycerophosphoinositolChEBI
PI(20:4(5Z,8Z,11Z,14Z)/0:0)ChEBI
1-Arachidonoyl-gpiHMDB
1-Arachidonoyl-glycero-3-phospho-(1'-myo-inositol)HMDB
1-Arachidonoyl-glycero-3-phospho-(1’-myo-inositol)HMDB
1-Arachidonoyl-lysophosphatidylinositolHMDB
GPI(20:4(5Z,8Z,11Z,14Z))HMDB
GPI(20:4(5Z,8Z,11Z,14Z)/0:0)HMDB
GPI(20:4)HMDB
GPI(20:4n6)HMDB
GPI(20:4n6/0:0)HMDB
GPI(20:4W6)HMDB
GPI(20:4W6/0:0)HMDB
LPI(20:4(5Z,8Z,11Z,14Z))HMDB
LPI(20:4(5Z,8Z,11Z,14Z)/0:0)HMDB
LPI(20:4)HMDB
LPI(20:4n6)HMDB
LPI(20:4n6/0:0)HMDB
LPI(20:4W6)HMDB
LPI(20:4W6/0:0)HMDB
LysoPI(20:4(5Z,8Z,11Z,14Z))HMDB
LysoPI(20:4)HMDB
LysoPI(20:4n6)HMDB
LysoPI(20:4n6/0:0)HMDB
LysoPI(20:4W6)HMDB
LysoPI(20:4W6/0:0)HMDB
Lysophosphatidylinositol(20:4(5Z,8Z,11Z,14Z))HMDB
Lysophosphatidylinositol(20:4(5Z,8Z,11Z,14Z)/0:0)HMDB
Lysophosphatidylinositol(20:4)HMDB
Lysophosphatidylinositol(20:4n6)HMDB
Lysophosphatidylinositol(20:4n6/0:0)HMDB
Lysophosphatidylinositol(20:4W6)HMDB
Lysophosphatidylinositol(20:4W6/0:0)HMDB
1-Arachidonoyl-sn-glycero-3-phospho-D-myo-inositolHMDB
LysoPI(20:4(5Z,8Z,11Z,14Z)/0:0)HMDB
Chemical FormulaC29H49O12P
Average Molecular Weight620.6659
Monoisotopic Molecular Weight620.296163544
IUPAC Name[(2R)-2-hydroxy-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]propoxy]({[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy})phosphinic acid
Traditional Name(2R)-2-hydroxy-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]propoxy([(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy)phosphinic acid
CAS Registry NumberNot Available
SMILES
CCCCC\C=C/C\C=C/C\C=C/C\C=C/CCCC(=O)OC[C@@H](O)COP(O)(=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
InChI Identifier
InChI=1S/C29H49O12P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-23(31)39-20-22(30)21-40-42(37,38)41-29-27(35)25(33)24(32)26(34)28(29)36/h6-7,9-10,12-13,15-16,22,24-30,32-36H,2-5,8,11,14,17-21H2,1H3,(H,37,38)/b7-6-,10-9-,13-12-,16-15-/t22-,24-,25-,26+,27-,28-,29-/m1/s1
InChI KeyLXUGKKVCSTYZFK-HYNUQJCBSA-N
Chemical Taxonomy
Description belongs to the class of organic compounds known as 1-acyl-sn-glycerol-3-phosphoinositols. These are glycerophosphoinositols where the glycerol is acylated only at position O-1 with a fatty acid.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassGlycerophospholipids
Sub ClassGlycerophosphoinositols
Direct Parent1-acyl-sn-glycerol-3-phosphoinositols
Alternative Parents
Substituents
  • 1-acyl-sn-glycerol-3-phosphoinositol
  • Inositol phosphate
  • Dialkyl phosphate
  • Cyclohexanol
  • Fatty acid ester
  • Cyclitol or derivatives
  • Fatty acyl
  • Alkyl phosphate
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • Cyclic alcohol
  • Carboxylic acid ester
  • Secondary alcohol
  • Carboxylic acid derivative
  • Polyol
  • Monocarboxylic acid or derivatives
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Organic oxide
  • Alcohol
  • Organooxygen compound
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Ontology
StatusDetected but not Quantified
OriginNot Available
BiofunctionNot Available
ApplicationNot Available
Cellular locationsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.41ALOGPS
logP2.4ChemAxon
logS-4.2ALOGPS
pKa (Strongest Acidic)1.83ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count7ChemAxon
Polar Surface Area203.44 ŲChemAxon
Rotatable Bond Count22ChemAxon
Refractivity159.85 m³·mol⁻¹ChemAxon
Polarizability64.86 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Spectra
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
LiverDetected but not QuantifiedNot QuantifiedNot SpecifiedNot Specified
Normal		 details
Abnormal Concentrations
Not Available
HMDB IDHMDB0061690
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID83053
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available