Toggle navigation
BMDB
Browse
Metabolites
Biospecimens
Classes
Pathways
Proteins
Reactions
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Sequence Search
Advanced Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
NMR Search
Downloads
About
About the Bovine Metabolome Database
Citing the BMDB
Wishart Research Group
TMIC Wishart Node
Contact Us
metabolites
pathways
proteins
reactions
Search
Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
Showing structure for BMDB0006575 (Lacto-N-biose I)
5288905 -OEChem-09032121193D 51 52 0 1 0 0 0 0 0999 V2000 0.2199 -0.4335 -0.9088 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.6993 0.7283 -0.3332 O 0 0 0 0 0 0 0 0 0 0 0 0 1.7075 0.8950 0.3040 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.4330 2.3696 -0.7909 O 0 0 0 0 0 0 0 0 0 0 0 0 2.2540 -2.3925 -1.2146 O 0 0 0 0 0 0 0 0 0 0 0 0 4.9266 -1.2921 -1.1036 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.1118 -0.0274 1.8319 O 0 0 0 0 0 0 0 0 0 0 0 0 4.2830 1.3980 -0.8242 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6088 3.2891 -0.5977 O 0 0 0 0 0 0 0 0 0 0 0 0 1.8673 2.7676 2.3059 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.7269 -3.7509 -0.4831 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.5450 -2.1096 0.6698 N 0 0 0 0 0 0 0 0 0 0 0 0 -0.8907 0.0997 -0.1844 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.9827 -0.9700 -0.1032 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.4090 1.3387 -0.9214 C 0 0 1 0 0 0 0 0 0 0 0 0 1.4042 -0.4357 -0.1123 C 0 0 2 0 0 0 0 0 0 0 0 0 -2.7541 1.8037 -0.3510 C 0 0 1 0 0 0 0 0 0 0 0 0 2.5385 -1.0171 -0.9592 C 0 0 1 0 0 0 0 0 0 0 0 0 3.8737 -0.9080 -0.2235 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.2807 -0.3841 0.4613 C 0 0 2 0 0 0 0 0 0 0 0 0 4.1058 0.5151 0.2855 C 0 0 2 0 0 0 0 0 0 0 0 0 2.8945 0.9773 1.1028 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.3709 2.9262 -1.1810 C 0 0 0 0 0 0 0 0 0 0 0 0 3.0282 2.4213 1.5721 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9579 -3.4059 0.4103 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.3323 -4.4030 1.3485 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.5815 0.3926 0.8275 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1813 -1.3230 -1.1247 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.5104 1.1120 -1.9904 H 0 0 0 0 0 0 0 0 0 0 0 0 1.2275 -1.0704 0.7666 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.6300 2.1802 0.6729 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5962 -0.5212 -1.9356 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8920 -1.6084 0.6208 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.0819 -1.1290 0.4223 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0262 0.5598 0.8770 H 0 0 0 0 0 0 0 0 0 0 0 0 2.7550 0.3303 1.9790 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9509 -1.9379 1.4761 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.5672 2.6031 -2.2087 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.7261 3.8094 -1.2062 H 0 0 0 0 0 0 0 0 0 0 0 0 3.9084 2.5619 2.2068 H 0 0 0 0 0 0 0 0 0 0 0 0 3.0873 3.1147 0.7276 H 0 0 0 0 0 0 0 0 0 0 0 0 0.3942 2.0407 -1.1821 H 0 0 0 0 0 0 0 0 0 0 0 0 1.3865 -2.4336 -1.6524 H 0 0 0 0 0 0 0 0 0 0 0 0 4.7307 -2.1915 -1.4173 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1838 0.1879 2.0083 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4293 1.4916 -1.2794 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1706 2.4954 -0.5816 H 0 0 0 0 0 0 0 0 0 0 0 0 1.8187 2.1781 3.0777 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.5320 -4.1177 2.3853 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2521 -4.4373 1.1808 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.7545 -5.3954 1.1685 H 0 0 0 0 0 0 0 0 0 0 0 0 1 13 1 0 0 0 0 1 16 1 0 0 0 0 2 17 1 0 0 0 0 2 20 1 0 0 0 0 3 16 1 0 0 0 0 3 22 1 0 0 0 0 4 15 1 0 0 0 0 4 42 1 0 0 0 0 5 18 1 0 0 0 0 5 43 1 0 0 0 0 6 19 1 0 0 0 0 6 44 1 0 0 0 0 7 20 1 0 0 0 0 7 45 1 0 0 0 0 8 21 1 0 0 0 0 8 46 1 0 0 0 0 9 23 1 0 0 0 0 9 47 1 0 0 0 0 10 24 1 0 0 0 0 10 48 1 0 0 0 0 11 25 2 0 0 0 0 12 14 1 0 0 0 0 12 25 1 0 0 0 0 12 37 1 0 0 0 0 13 14 1 0 0 0 0 13 15 1 0 0 0 0 13 27 1 0 0 0 0 14 20 1 0 0 0 0 14 28 1 0 0 0 0 15 17 1 0 0 0 0 15 29 1 0 0 0 0 16 18 1 0 0 0 0 16 30 1 0 0 0 0 17 23 1 0 0 0 0 17 31 1 0 0 0 0 18 19 1 0 0 0 0 18 32 1 0 0 0 0 19 21 1 0 0 0 0 19 33 1 0 0 0 0 20 34 1 0 0 0 0 21 22 1 0 0 0 0 21 35 1 0 0 0 0 22 24 1 0 0 0 0 22 36 1 0 0 0 0 23 38 1 0 0 0 0 23 39 1 0 0 0 0 24 40 1 0 0 0 0 24 41 1 0 0 0 0 25 26 1 0 0 0 0 26 49 1 0 0 0 0 26 50 1 0 0 0 0 26 51 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 5288905 > <PUBCHEM_CONFORMER_RMSD> 1 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 17 24 34 38 29 5 22 26 6 39 14 36 32 12 21 2 35 8 31 28 30 27 18 9 13 4 37 19 33 25 16 23 15 10 3 7 11 20 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 34 1 -0.56 10 -0.68 11 -0.57 12 -0.73 13 0.28 14 0.3 15 0.28 16 0.56 17 0.28 18 0.28 19 0.28 2 -0.56 20 0.56 21 0.28 22 0.28 23 0.28 24 0.28 25 0.57 26 0.06 3 -0.56 37 0.37 4 -0.68 42 0.4 43 0.4 44 0.4 45 0.4 46 0.4 47 0.4 48 0.4 5 -0.68 6 -0.68 7 -0.68 8 -0.68 9 -0.68 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 8.4 > <PUBCHEM_PHARMACOPHORE_FEATURES> 21 1 1 acceptor 1 10 acceptor 1 10 donor 1 11 acceptor 1 12 donor 1 2 acceptor 1 3 acceptor 1 4 acceptor 1 4 donor 1 5 acceptor 1 5 donor 1 6 acceptor 1 6 donor 1 7 acceptor 1 7 donor 1 8 acceptor 1 8 donor 1 9 acceptor 1 9 donor 6 2 13 14 15 17 20 rings 6 3 16 18 19 21 22 rings > <PUBCHEM_HEAVY_ATOM_COUNT> 26 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 10 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 2 > <PUBCHEM_CONFORMER_ID> 0050B3C900000001 > <PUBCHEM_MMFF94_ENERGY> 67.1048 > <PUBCHEM_FEATURE_SELFOVERLAP> 106.713 > <PUBCHEM_SHAPE_FINGERPRINT> 10366900 7 18271525402691454644 11552529 35 17844817090256378979 12500047 106 18408885101005470974 12553582 1 17757850183292175127 12633257 1 18342742918401386074 12788726 201 18190728911922517195 13004483 165 18052523654564669479 13140716 1 17974577102260042627 13583140 156 18130504249084389662 14081887 123 18265041612518607682 14178342 30 18189323727403219474 14223421 5 18198057186859145594 15042514 8 18189345718110853459 17980427 26 17835487498082391581 20681677 76 18129376171560737890 21033648 29 18410286982847996529 23557571 272 18118675754184430994 23559900 14 18410574024175539220 469060 322 16978116174846548926 49207404 50 17912923074348602122 495365 180 17702360928114716928 6287921 2 17837784678594047568 7399639 24 17767675423534536648 7808743 9 18261114110188295236 81228 2 18190462843072306707 84936 182 17834385723223134181 9709674 26 18342451586326894606 9981440 41 17054098900942202896 > <PUBCHEM_SHAPE_MULTIPOLES> 465.52 8.43 4.69 1.45 4.17 3.23 -0.61 -3.07 0.87 -4.86 -0.77 0.63 -0.43 2.76 > <PUBCHEM_SHAPE_SELFOVERLAP> 950.838 > <PUBCHEM_SHAPE_VOLUME> 262.7 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Download:
MOL
SDF
3D-SDF
PDB
SMILES
InChI
×
Structure for BMDB0006575 (Lacto-N-biose I)