Toggle navigation
BMDB
Browse
Metabolites
Biospecimens
Classes
Pathways
Proteins
Reactions
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Sequence Search
Advanced Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
NMR Search
Downloads
About
About the Bovine Metabolome Database
Citing the BMDB
Wishart Research Group
TMIC Wishart Node
Contact Us
metabolites
pathways
proteins
reactions
Search
Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
Showing structure for BMDB0010199 (11b-PGF2a)
5280886 -OEChem-09032123453D 59 59 0 1 0 0 0 0 0999 V2000 -3.7475 0.3647 2.4771 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.1897 1.1562 -1.8626 O 0 0 0 0 0 0 0 0 0 0 0 0 1.5491 4.2003 -1.6260 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9159 -2.4652 -3.0683 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.0674 -1.5613 -2.4378 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.1098 0.1133 0.6540 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.8976 1.5575 0.1625 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.5901 0.1060 1.0866 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.1974 1.8305 -0.6062 C 0 0 2 0 0 0 0 0 0 0 0 0 -4.2839 1.2181 0.2803 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.1318 -0.3214 1.7397 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.6632 1.7675 -0.6533 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.3010 -1.7115 2.2852 C 0 0 0 0 0 0 0 0 0 0 0 0 0.3029 2.6412 -0.3343 C 0 0 0 0 0 0 0 0 0 0 0 0 1.5422 2.8500 -1.1587 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.7669 -2.8440 1.8029 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8344 2.6331 -0.3597 C 0 0 0 0 0 0 0 0 0 0 0 0 2.9195 1.2473 0.2869 C 0 0 0 0 0 0 0 0 0 0 0 0 0.1192 -2.8955 0.5924 C 0 0 0 0 0 0 0 0 0 0 0 0 4.1708 1.0555 1.1499 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4369 -3.7673 -0.5420 C 0 0 0 0 0 0 0 0 0 0 0 0 4.2947 -0.3499 1.7398 C 0 0 0 0 0 0 0 0 0 0 0 0 0.4722 -3.8407 -1.7724 C 0 0 0 0 0 0 0 0 0 0 0 0 5.5458 -0.4837 2.5950 C 0 0 0 0 0 0 0 0 0 0 0 0 0.7164 -2.5004 -2.4310 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.0049 -0.5666 -0.2046 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.8780 2.2219 1.0392 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.0403 -0.8714 0.8801 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.3600 2.8977 -0.7881 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1065 0.8056 -0.3136 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6955 1.9810 0.9513 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.1896 0.3719 2.5900 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1049 -0.1967 1.3775 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.5463 1.1626 -1.5492 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.7005 0.3519 2.6701 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.0409 1.3385 -2.2959 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.9376 -1.7982 3.1637 H 0 0 0 0 0 0 0 0 0 0 0 0 0.1976 3.2510 0.5601 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5501 2.1958 -2.0386 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9801 -3.7821 2.3085 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9183 3.4057 0.4166 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6963 2.7903 -1.0209 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9005 0.4835 -0.5004 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0451 1.0697 0.9228 H 0 0 0 0 0 0 0 0 0 0 0 0 1.0857 -3.3082 0.9091 H 0 0 0 0 0 0 0 0 0 0 0 0 0.3370 -1.8978 0.2041 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1597 1.7918 1.9632 H 0 0 0 0 0 0 0 0 0 0 0 0 5.0591 1.2691 0.5424 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7552 4.3267 -2.1737 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4181 -3.3782 -0.8432 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.6035 -4.7861 -0.1701 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4127 -0.5745 2.3509 H 0 0 0 0 0 0 0 0 0 0 0 0 4.3269 -1.0899 0.9319 H 0 0 0 0 0 0 0 0 0 0 0 0 0.0309 -4.5046 -2.5234 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4379 -4.2631 -1.4706 H 0 0 0 0 0 0 0 0 0 0 0 0 6.4473 -0.2942 2.0036 H 0 0 0 0 0 0 0 0 0 0 0 0 5.5274 0.2232 3.4305 H 0 0 0 0 0 0 0 0 0 0 0 0 5.6161 -1.4951 3.0071 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0693 -1.6031 -3.5104 H 0 0 0 0 0 0 0 0 0 0 0 0 1 8 1 0 0 0 0 1 35 1 0 0 0 0 2 9 1 0 0 0 0 2 36 1 0 0 0 0 3 15 1 0 0 0 0 3 49 1 0 0 0 0 4 25 1 0 0 0 0 4 59 1 0 0 0 0 5 25 2 0 0 0 0 6 7 1 0 0 0 0 6 8 1 0 0 0 0 6 11 1 0 0 0 0 6 26 1 0 0 0 0 7 9 1 0 0 0 0 7 12 1 0 0 0 0 7 27 1 0 0 0 0 8 10 1 0 0 0 0 8 28 1 0 0 0 0 9 10 1 0 0 0 0 9 29 1 0 0 0 0 10 30 1 0 0 0 0 10 31 1 0 0 0 0 11 13 1 0 0 0 0 11 32 1 0 0 0 0 11 33 1 0 0 0 0 12 14 2 0 0 0 0 12 34 1 0 0 0 0 13 16 2 0 0 0 0 13 37 1 0 0 0 0 14 15 1 0 0 0 0 14 38 1 0 0 0 0 15 17 1 0 0 0 0 15 39 1 0 0 0 0 16 19 1 0 0 0 0 16 40 1 0 0 0 0 17 18 1 0 0 0 0 17 41 1 0 0 0 0 17 42 1 0 0 0 0 18 20 1 0 0 0 0 18 43 1 0 0 0 0 18 44 1 0 0 0 0 19 21 1 0 0 0 0 19 45 1 0 0 0 0 19 46 1 0 0 0 0 20 22 1 0 0 0 0 20 47 1 0 0 0 0 20 48 1 0 0 0 0 21 23 1 0 0 0 0 21 50 1 0 0 0 0 21 51 1 0 0 0 0 22 24 1 0 0 0 0 22 52 1 0 0 0 0 22 53 1 0 0 0 0 23 25 1 0 0 0 0 23 54 1 0 0 0 0 23 55 1 0 0 0 0 24 56 1 0 0 0 0 24 57 1 0 0 0 0 24 58 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 5280886 > <PUBCHEM_CONFORMER_RMSD> 1.2 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 49 89 52 36 117 72 90 59 76 96 101 103 102 2 122 97 75 40 91 61 85 42 25 22 79 120 118 55 125 130 14 50 16 119 24 83 44 7 84 109 93 123 12 65 70 58 88 11 112 124 21 121 60 67 63 62 56 92 43 3 15 128 31 94 32 115 8 69 80 54 74 127 110 98 100 116 23 10 4 86 131 37 18 78 13 107 114 9 82 105 71 27 30 34 53 47 113 108 46 129 41 51 132 39 64 19 5 73 20 104 95 66 81 45 33 35 29 87 38 57 106 6 48 68 111 126 28 77 26 99 17 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 25 1 -0.68 11 0.14 12 -0.29 13 -0.29 14 -0.29 15 0.42 16 -0.29 19 0.14 2 -0.68 23 0.06 25 0.66 3 -0.68 34 0.15 35 0.4 36 0.4 37 0.15 38 0.15 4 -0.65 40 0.15 49 0.4 5 -0.57 59 0.5 7 0.14 8 0.28 9 0.28 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 13 > <PUBCHEM_PHARMACOPHORE_FEATURES> 13 1 1 acceptor 1 1 donor 1 2 acceptor 1 2 donor 1 24 hydrophobe 1 3 acceptor 1 3 donor 1 4 acceptor 1 5 acceptor 3 4 5 25 anion 4 16 19 21 23 hydrophobe 4 17 18 20 22 hydrophobe 5 6 7 8 9 10 rings > <PUBCHEM_HEAVY_ATOM_COUNT> 25 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 5 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 2 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 1 > <PUBCHEM_CONFORMER_ID> 0050947600000001 > <PUBCHEM_MMFF94_ENERGY> 33.2084 > <PUBCHEM_FEATURE_SELFOVERLAP> 66.031 > <PUBCHEM_SHAPE_FINGERPRINT> 11427363 43 17550062255640589118 12539773 59 17046304591946008290 12788726 201 17623574558810908143 13004483 165 17046835694753598895 17921350 177 18189916351522987892 23598288 3 17979078507063990792 238918 7 18269827615447508682 3493558 16 17986083375249195502 > <PUBCHEM_SHAPE_MULTIPOLES> 485.14 7.46 5.26 2.97 5.95 2.05 0.76 -3.82 -5.85 1.31 3.63 1 2.46 0.14 > <PUBCHEM_SHAPE_SELFOVERLAP> 945.91 > <PUBCHEM_SHAPE_VOLUME> 291 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Download:
MOL
SDF
3D-SDF
PDB
SMILES
InChI
×
Structure for BMDB0010199 (11b-PGF2a)