Toggle navigation
BMDB
Browse
Metabolites
Biospecimens
Classes
Pathways
Proteins
Reactions
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Sequence Search
Advanced Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
NMR Search
Downloads
About
About the Bovine Metabolome Database
Citing the BMDB
Wishart Research Group
TMIC Wishart Node
Contact Us
metabolites
pathways
proteins
reactions
Search
Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
Showing structure for BMDB0063902 (Hydroxyprolylhydroxyproline)
53902187 -OEChem-12272223433D 33 34 0 1 0 0 0 0 0999 V2000 3.0775 2.8716 -0.0190 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6090 0.8617 0.8476 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.6718 -1.5179 -0.9549 O 0 0 0 0 0 0 0 0 0 0 0 0 2.8911 -2.6032 0.0949 O 0 0 0 0 0 0 0 0 0 0 0 0 1.8537 -1.3298 1.6754 O 0 0 0 0 0 0 0 0 0 0 0 0 0.7713 0.1776 -0.3231 N 0 0 0 0 0 0 0 0 0 0 0 0 -2.6804 0.1735 -1.3225 N 0 0 0 0 0 0 0 0 0 0 0 0 -1.6362 0.5676 -0.3692 C 0 0 1 0 0 0 0 0 0 0 0 0 2.0055 -0.5429 -0.6053 C 0 0 1 0 0 0 0 0 0 0 0 0 3.0780 0.5358 -0.6476 C 0 0 0 0 0 0 0 0 0 0 0 0 1.0440 1.5424 0.1199 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5537 1.6014 0.3150 C 0 0 2 0 0 0 0 0 0 0 0 0 -2.2350 0.4330 1.0285 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4802 -0.3593 -0.5818 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.6200 -0.1617 0.8084 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.5652 -0.7451 -0.5899 C 0 0 0 0 0 0 0 0 0 0 0 0 2.2229 -1.5047 0.5237 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.3721 1.6041 -0.5871 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9047 -1.0904 -1.5484 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0725 0.1799 -0.3593 H 0 0 0 0 0 0 0 0 0 0 0 0 3.1613 0.9524 -1.6596 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4980 1.7596 1.0429 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7139 2.2428 -0.6554 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8193 1.3600 1.3505 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6343 -0.2395 1.6522 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.2889 1.4071 1.5267 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8777 -0.9139 1.5601 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.1450 -1.7562 -0.5742 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.5476 -0.7809 -1.0701 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3020 -0.2619 -2.1614 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0460 2.8151 0.0482 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6016 1.2391 1.7438 H 0 0 0 0 0 0 0 0 0 0 0 0 3.0445 -3.2452 0.8205 H 0 0 0 0 0 0 0 0 0 0 0 0 1 12 1 0 0 0 0 1 31 1 0 0 0 0 2 15 1 0 0 0 0 2 32 1 0 0 0 0 3 14 2 0 0 0 0 4 17 1 0 0 0 0 4 33 1 0 0 0 0 5 17 2 0 0 0 0 6 9 1 0 0 0 0 6 11 1 0 0 0 0 6 14 1 0 0 0 0 7 8 1 0 0 0 0 7 16 1 0 0 0 0 7 30 1 0 0 0 0 8 13 1 0 0 0 0 8 14 1 0 0 0 0 8 18 1 0 0 0 0 9 10 1 0 0 0 0 9 17 1 0 0 0 0 9 19 1 0 0 0 0 10 12 1 0 0 0 0 10 20 1 0 0 0 0 10 21 1 0 0 0 0 11 12 1 0 0 0 0 11 22 1 0 0 0 0 11 23 1 0 0 0 0 12 24 1 0 0 0 0 13 15 1 0 0 0 0 13 25 1 0 0 0 0 13 26 1 0 0 0 0 15 16 1 0 0 0 0 15 27 1 0 0 0 0 16 28 1 0 0 0 0 16 29 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 53902187 > <PUBCHEM_CONFORMER_RMSD> 0.6 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 23 24 13 29 14 30 7 22 28 6 18 20 19 9 25 4 17 16 2 5 8 27 10 12 21 11 15 26 3 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 19 1 -0.68 11 0.3 12 0.28 14 0.57 15 0.28 16 0.27 17 0.66 2 -0.68 3 -0.57 30 0.36 31 0.4 32 0.4 33 0.5 4 -0.65 5 -0.57 6 -0.66 7 -0.9 8 0.33 9 0.36 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 5 > <PUBCHEM_PHARMACOPHORE_FEATURES> 12 1 1 acceptor 1 1 donor 1 2 acceptor 1 2 donor 1 3 acceptor 1 4 acceptor 1 5 acceptor 1 7 cation 1 7 donor 3 4 5 17 anion 5 6 9 10 11 12 rings 5 7 8 13 15 16 rings > <PUBCHEM_HEAVY_ATOM_COUNT> 17 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 4 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 1 > <PUBCHEM_CONFORMER_ID> 03367B6B00000001 > <PUBCHEM_MMFF94_ENERGY> 39.5741 > <PUBCHEM_FEATURE_SELFOVERLAP> 60.954 > <PUBCHEM_SHAPE_FINGERPRINT> 10366900 7 17968381246499436465 10382601 240 18335983151105378704 107287 299 17968103048666934806 10980938 120 18410007766928540140 11086676 242 18341613651208372008 12202030 40 16515676698114815130 12251169 10 18342177726464343131 12553582 1 18194678160099945878 12644460 14 18408325484241973128 12932764 1 18333448738042693279 13296908 3 17240481382127038319 13380535 21 18335988678480193406 13533116 47 18334298635331229915 13538477 17 17989201585808618087 14144814 61 18272368676607248543 15219456 202 17894907404444410797 15279307 12 18200026390620147838 15375462 189 18336263444960567794 15669948 3 17346312760824287839 15775835 57 18343025527207179749 16945 1 18410852170658122828 1813 80 17913501142698214438 18186145 218 18344146990402184941 19049666 15 17604697864207463365 201361 129 18340490062020360152 20233049 118 16845577500134200816 20279233 1 17240475931818749363 20339313 130 18199754639713314630 204376 136 18118121613625879612 20539784 86 18334015003689871680 20559304 39 18342739572621582482 20645477 70 18262222353394698951 20671657 1 18272647995673900316 20715346 28 17748819713803722447 20871998 22 18124877859338997062 21524375 3 18053658359396659268 21730867 7 18186802495521539374 2255824 54 18412267250681239742 22854114 111 18410011074048148268 23557571 272 15141222318020713551 23559900 14 16733260162305535303 25 1 18337678636853482804 2748010 2 17908405980023619316 31174 14 18334296452722750885 474 4 18193556894299155284 495365 180 17459723996431756391 6049 1 17676484995554167949 633830 44 18269845379110862276 7364860 26 18411978062075257558 74978 22 18341891887669088599 7615 1 17917695916764517909 77492 1 17918269861776103621 81228 2 17183880495124847048 81539 233 18188488098613634372 88987 49 16128362813855781869 9981440 41 16477949474187122224 > <PUBCHEM_SHAPE_MULTIPOLES> 310.54 6.96 2.11 1.13 5.24 0.08 -0.15 0.97 -0.82 -2.85 -0.24 0.37 -0.22 -0.62 > <PUBCHEM_SHAPE_SELFOVERLAP> 648.383 > <PUBCHEM_SHAPE_VOLUME> 177.2 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Download:
MOL
SDF
3D-SDF
PDB
SMILES
InChI
×
Structure for BMDB0063902 (Hydroxyprolylhydroxyproline)