Search Phenotypes

Ataxia and dyslipidemia, LIPC-related

Weber et al. (2026) investigated an inherited neuromuscular disorder in Brown Swiss cattle. Use of whole genome sequencing resulted in the identification of a "rare homozygous missense variant in LIPC (chr10:51715800G>C; NM_001035410.1:c.924C>G; p.Phe308Leu; omia.variant:1842) ... and in-silico predictions classified this variant as deleterious. Population-level genotyping of over 20.000 BS cattle revealed a variant allele frequency of 1...

OMIA ID: 3023Inheritance: 5Characterised: YesYear: 2026

Coat colour, dilution, PMEL-related

Gutiérrez-Gil et al. (2007): c.64G>A Jolly et al. (2008): c.50_52delTTC Laible et al. (2021): "To better adapt dairy cattle to rapidly warming climates, we aimed to lighten their coat color by genome editing. ... Using gRNA/Cas9-mediated editing, we introduced a three bp deletion in the pre-melanosomal protein 17 gene (PMEL) proposed as causative variant for the semi-dominant color dilution phenotype observed in Galloway and Highland cattl...

OMIA ID: 1545Inheritance: 5Characterised: YesYear: 2007

Glycogen storage disease II

By cloning and sequencing a very likely comparative candidate gene (based on the homologous human disorder), Dennis et al. (2000) identified two causal mutations in Brahman cattle, namely a frameshifting 2-bp deletion (c.1057delTA; the "E7" mutation) and a nonsense mutation (c.1783C>T; p.Arg595Ter; the "E13" mutation) in the bovine GAA gene; and a 2-bp frameshifting deletion (c.2454delCA; the "E18" mutation) in Shorthorns.

OMIA ID: 419Inheritance: 1Characterised: YesYear: 2000

Infertility, ABHD16B-related

Shan et al. (2020) reported "a Holstein sire named Tarantino who had been approved for artificial insemination that is based on normal semen characteristics (i.e., morphology, thermoresistance, motility, sperm concentration), but had no progeny after 412 first inseminations".

OMIA ID: 2561Inheritance: 5Characterised: YesYear: 2020

Mannosidosis, alpha

This was one of the first inherited lysosomal storage disorders to be studied extensively in animals. The pioneering work was done by Jolly and colleagues at Massy University in New Zealand, who developed an enzyme assay that enabled carriers to be distinguished from homozygote normals with a high degree of accuracy (Jolly et al., 1973). More than twenty years later, following the cloning and characterisation of the human gene for alpha mannos...

OMIA ID: 625Inheritance: The inherited form of this disorder is a classic autosomal recessive inborn e...Characterised: YesYear: 1997

Muscle weakness, CACNA1S-related — Recumbency

Al-Khudhair et al. (2024) report a variant in the CACNA1S gene (rs3423414874) as likely causal variant for this condition.

OMIA ID: 2819Inheritance: likely to be autosomal recessive with incomplete penetranceCharacterised: YesYear: 2024

Perinatal mortality syndrome, GCK-related

Pollott et al. (2022): "Using whole genome sequencing of only three cases and six carriers, the site of a novel variant causing perinatal mortality in Irish moiled calves was located. Four methods were used to interrogate the variant call format (VCF) data file of these nine animals, they are genotype criteria (GCR), autozygosity-by-difference (ABD), variant prediction scoring, and registered SNP information. From more than nine million varian...

OMIA ID: 2579Inheritance: Pollott et al. (2022): "An initial analysis was undertaken which suggested th...Characterised: YesYear: 2022